Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799998.1_cds_XP_016467559.1_5981
CDS Infomation

[gene=LOC107790171] [db_xref=GeneID:107790171] [protein=probable serine/threonine-protein kinase At4g35230] [protein_id=XP_016467559.1] [location=complement(join(3937..4188,8166..8279,8582..8740,8825..9013,9813..9898,11192..11297,12450..12583,14224..14359,14567..14778,14994..15066))] [gbkey=CDS]
Sequence

ATGGGCTGTTTACAGTCCAAAACTGCCAATATTAAGTCCACCATCGAACAACCTCCTAAA
GAAATAGATCTTGCGAATGGGAATCAAGATAAAGTGCCAGCTTTCAAGGAATTTGGTCTT
GCGGATCTCCGAGCTGCAACGAATGGGTTTAGCAGTGAATTGATAGTTTCTGAAAGTGGT
GAGAAAGCACCCAATATAGTCTACAGAGGGAAGCTTCGGAGCAATCGGCTTGTTGCCATT
AAGCGCTTCTCAAAGCAGTCATGGCCTCATCCTCATCAGTTTGTGGCAGAGGCTGCTGGA
GTGGGCAAGGTCAGACATAAGAGATTGGTCAATCTAATTGGTTGCTGTGCTGAGGGAGAT
GAAAGACTTTTGGTGGCAGAGTACATGCCTAATGATACACTCTCAAAGCATCTCTTTCAC
TGGGAAAAACAGCCCTTGCCTTGGGAGATGCGAGTCAGAGTTGCATACCATATTGCACAG
GTTCTGGATCATTGCAATGCTGAGAACAGAAAAATATATCATGATTTGAATGCTTACAGA
GTTCTTTTTGATGAGGATGGTGACCCTCGATTATCTAGCTTTGGCCTTATGAAAAACAGT
AGAGATGGAAAGAGTTATAGCACTAATCTGGCCTATACACCTCCTGAGTTTATGCGTACA
GGCAGGGTCATTGCGGAGAGTGTAATATACAGCTATGGGACTGTTCTGCTGGACCTTTTG
AGTGGAAAACATATTCCTCCAAGCCATGCATTAGATTTGATAAGGGGAAAGAATATGTTG
TTACTAATGGATTCATCCTTGGAAGGACAATATGCCGATGAAGATGCTACTGCATTGGTT
GAGCTTGCTTCGAAGTGCCTCCAGTATGAGGCTAAGGATCGGCCTGATTTCAAGTTCATT
CTTAATGCTGTAGTACCTCTCCAGAAGCAAGGGGAGGTTGTATCATATGTTTTAATGGGT
CTAACAAAAGCTCCAGTGGTGCTTCCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCA
GGAATGGACCTTACCGCTGTTCATGATATGTTGCTTAAGACAGGTTATAAAGATGAAGAG
GGTGCCGAAAATGAGCTCTCATTCCAAGAGTGGACGCAGCAAGTTCAAGATATGTTAAAC
ACCAAGAAATTTGGTGATATTGCTTTCAGGGATAAGGACTTTAAGAGTGCAATTGACTGT
TATTCGAAGTTAGTATCTATGATGCCTGTTCTTTCTGGGACTGTTTTTGTGAGGAGAGCC
CTCTCGTATTTGATAAATGGCCAGCCAGAACTTGCATTGAGAGATGCTATGCAGGCTCAG
GTCTGCTTGCCCGAGTGGCCTACTGCATTCTATATGCAGGCTCTTGCCCTCTCCAAACTT
GGAATGGAAATTGATGCACAAGACATGTTAAACGATGGAGCGTCCTTTGAAGCAAAGAAG
CAGAACAGTTGGCGCAACTGA

Peptide Sequence

PEP ID

XP_016467559.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana tabacum]
Sequence

MGCLQSKTANIKSTIEQPPKEIDLANGNQDKVPAFKEFGLADLRAATNGFSSELIVSESG
EKAPNIVYRGKLRSNRLVAIKRFSKQSWPHPHQFVAEAAGVGKVRHKRLVNLIGCCAEGD
ERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRVRVAYHIAQVLDHCNAENRKIYHDLNAYR
VLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFMRTGRVIAESVIYSYGTVLLDLL
SGKHIPPSHALDLIRGKNMLLLMDSSLEGQYADEDATALVELASKCLQYEAKDRPDFKFI
LNAVVPLQKQGEVVSYVLMGLTKAPVVLPTMLSPLGKACAGMDLTAVHDMLLKTGYKDEE
GAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKSAIDCYSKLVSMMPVLSGTVFVRRA
LSYLINGQPELALRDAMQAQVCLPEWPTAFYMQALALSKLGMEIDAQDMLNDGASFEAKK
QNSWRN

Transcript Sequence

Gene sequence data has not been registered.